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ABSTRACT To maintain a sufficient chlorine residual in water distribution systems (WDSs), chlorine dosage needs to be regulated. The majority of previous studies that aimed to optimize chlorine dosage in WDSs considered single-species water quality (WQ) models featuring chlorine decay with simple reaction kinetics. Recent efforts have proposed using multi-species water quality (MS-WQ) models to account for chlorine interactions with various chemical and microbiological species, thus providing a comprehensive and accurate evaluation of the WQ within WDSs. Nevertheless, the key challenge of implementing MS-WQ models within optimization frameworks is their high computational cost and poor scalability for larger WDSs. Furthermore, previous optimization studies generally relied on evolutionary algorithms (EAs), which require conducting a significant number of WQ simulations. Bayesian optimization (BO) has been recently suggested as an efficient alternative to EAs for the optimization of computationally expensive functions. This study aims to present a systematic comparison between BO and other widely used EAs for the optimization of MS-WQ in WDSs. A case study featuring a real-life, midsized benchmark WDS was implemented to comprehensively evaluate all three optimization techniques. The results revealed that BO is notably more computationally efficient and less sensitive to changes in the constraints than EAs.